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Please use this identifier to cite or link to this item:
http://hdl.handle.net/2289/4206
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| Title: | Bidirectional transport in a multispecies totally asymmetric exclusion-process model |
| Authors: | Muhuri, Sudipto Shagolsem, Lenin Rao, Madan |
| Issue Date: | Sep-2011 |
| Publisher: | The Americal Physical Society |
| Citation: | Physical Review E, 2011, Vol.84, 031921 |
| Abstract: | We study a minimal lattice model which describes bidirectional transport of “particles” driven along a onedimensional
track, as is observed in microtubule based, motor protein driven bidirectional transport of cargo
vesicles, lipid bodies, and organelles such asmitochondria. Thisminimal model, a multispecies totally asymmetric
exclusion process (TASEP) with directional switching, can provide a framework for understanding the interplay
between the switching dynamics of individual particles and the collectivemovement of particles in one dimension.
When switching is much faster than translocation, the steady-state density and current profiles of the particles
are homogeneous in the bulk and are well described by mean-field (MF) theory, as determined by comparison
to a Monte Carlo simulation. In this limit, we can map this model to the exactly solvable partially asymmetric
exclusion-process (PASEP) model. Away from this fast switching regime the MF theory fails, although the
average bulk density profile still remains homogeneous. We study the steady-state behavior as a function of the
ratio of the translocation and net switching rates Q and find a unique first-order phase transition at a finite Q
associated with a discontinuous change of the bulk density.When the switching rate is decreased further (keeping
translocation rate fixed), the system approaches a jammed phase with a net current that tends to zero as J ∼ 1/Q.
We numerically construct the phase diagram for finite Q. |
| Description: | Open Access |
| URI: | http://hdl.handle.net/2289/4206 |
| ISSN: | 1539-3755 1550-2376 (Online) |
| Alternative Location: | http://adsabs.harvard.edu/abs/2011PhRvE..84c1921M http://dx.doi.org/10.1103/PhysRevE.84.031921 |
| Copyright: | 2011 The American Physical Society |
| Appears in Collections: | Research Papers (SCM)
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