Bidirectional transport in a multispecies totally asymmetric exclusion-process model
Loading...
Date
Journal Title
Journal ISSN
Volume Title
Publisher
The Americal Physical Society
DOI
Abstract
We study a minimal lattice model which describes bidirectional transport of “particles” driven along a onedimensional
track, as is observed in microtubule based, motor protein driven bidirectional transport of cargo
vesicles, lipid bodies, and organelles such asmitochondria. Thisminimal model, a multispecies totally asymmetric
exclusion process (TASEP) with directional switching, can provide a framework for understanding the interplay
between the switching dynamics of individual particles and the collectivemovement of particles in one dimension.
When switching is much faster than translocation, the steady-state density and current profiles of the particles
are homogeneous in the bulk and are well described by mean-field (MF) theory, as determined by comparison
to a Monte Carlo simulation. In this limit, we can map this model to the exactly solvable partially asymmetric
exclusion-process (PASEP) model. Away from this fast switching regime the MF theory fails, although the
average bulk density profile still remains homogeneous. We study the steady-state behavior as a function of the
ratio of the translocation and net switching rates Q and find a unique first-order phase transition at a finite Q
associated with a discontinuous change of the bulk density.When the switching rate is decreased further (keeping
translocation rate fixed), the system approaches a jammed phase with a net current that tends to zero as J ∼ 1/Q.
We numerically construct the phase diagram for finite Q.
Description
Open Access
Keywords
Citation
Physical Review E, 2011, Vol.84, 031921
Collections
Endorsement
Review
Supplemented By
Referenced By
Rights and licensing
2011 The American Physical Society

